WRF Portal Run: 'AAutomatedTestCO-run'

Workflow was launched Thu Mar 24 16:17:06 MDT 2011
WorkflowNameAAutomatedTestCO
Computernewhep.fsl.noaa.gov (Linux)
Account Namemapp
Workflow MgrInternal SGE
Output Dir/export/jeff/wrfportal-runs/AAutomatedTestCO-run
WRF Root Dir/export/WRF32/WRFV3 (WRF Model Version 3.2 -April 2, 2010)
WPS Root Dir/export/WRF32/WPS (WRF Pre-Processing System Version 3.2 -April 2, 2010)
Environment Variables
BASH=/bin/bash
BASH_ARGC=()
BASH_ARGV=()
BASH_LINENO=()
BASH_SOURCE=()
BASH_VERSINFO=([0]="3" [1]="2" [2]="25" [3]="1" [4]="release" [5]="x86_64-redhat-linux-gnu")
BASH_VERSION='3.2.25(1)-release'
COLORS=/etc/DIR_COLORS
COLUMNS=80
CVS_RSH=ssh
DIRSTACK=()
EUID=1005
E_FILE=7496@cessna.fsl.noaa.gov
GROUPS=()
G_BROKEN_FILENAMES=1
HISTFILE=/home/smith/.bash_history
HISTFILESIZE=1000
HISTSIZE=1000
HOME=/home/smith
HOSTNAME=newhep.fsl.noaa.gov
HOSTTYPE=x86_64
IFS=$' \t\n'
INPUTRC=/etc/inputrc
LANG=en_US.UTF-8
LESSOPEN='|/usr/bin/lesspipe.sh %s'
LINES=24
LM_LICENSE_FILE=7496@137.75.21.54
LOGNAME=smith
LS_COLORS='no=00:fi=00:di=01;34:ln=01;36:pi=40;33:so=01;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:ex=01;32:*.cmd=01;32:*.exe=01;32:*.com=01;32:*.btm=01;32:*.bat=01;32:*.sh=01;32:*.csh=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.gz=01;31:*.bz2=01;31:*.bz=01;31:*.tz=01;31:*.rpm=01;31:*.cpio=01;31:*.jpg=01;35:*.gif=01;35:*.bmp=01;35:*.xbm=01;35:*.xpm=01;35:*.png=01;35:*.tif=01;35:'
MACHTYPE=x86_64-redhat-linux-gnu
MAIL=/var/spool/mail/smith
MAILCHECK=60
OPTERR=1
OPTIND=1
OSTYPE=linux-gnu
PATH=/home/smith/jdk1.6.0_14/bin:/usr/local/sge/bin/lx24-amd64:/usr/kerberos/bin:/usr/local/bin:/bin:/usr/bin:/home/smith/bin:/opt/pgi/linux86-64/6.2/bin/
PIPESTATUS=([0]="0")
PPID=7777
PS1='\s-\v\$ '
PS2='> '
PS4='+ '
PWD=/home/smith
SGE_ROOT=/usr/local/sge
SHELL=/bin/bash
SHELLOPTS=braceexpand:emacs:hashall:histexpand:history:interactive-comments:monitor
SHLVL=1
SSH_ASKPASS=/usr/libexec/openssh/gnome-ssh-askpass
SSH_CLIENT='137.75.201.20 54657 22'
SSH_CONNECTION='137.75.201.20 54657 137.75.70.72 22'
SSH_TTY=/dev/pts/1
TERM=vt100
UID=1005
USER=smith
_=/home/smith/.bashrc
consoletype=pty
tmpid=1005

Workflow Tasks Summary

Task#ProcWallClockQueuePERetriesThrottle
def_ungrib106:00   make13
def_metgrid106:00   make13
def_real106:00   make13

Workflow Environment Variables

Env Var NameEnv Var Value

Workflow Tasks Environment Variables

TaskEnv Var NameEnv Var Value
def_metgridEXT_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_metgridEXT_DATAROOT$OUTPUT_RUN_DIR
def_metgridFCST_INTERVAL3
def_metgridFCST_INTERVAL3
def_metgridFCST_INTERVAL3
def_metgridFCST_LENGTH12
def_metgridFCST_LENGTH12
def_metgridFCST_LENGTH12
def_metgridFORMAT%y%j%H00%F
def_metgridMETGRID_INPUT_DIR$OUTPUT_RUN_DIR/wps-output
def_metgridMETGRID_PROC$NUM_PROCS
def_metgridMOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_metgridMOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_metgridMOAD_DATAROOT$OUTPUT_RUN_DIR
def_metgridMOAD_DATAROOT$OUTPUT_RUN_DIR
def_metgridREALPROC$NUM_PROCS
def_metgridSOURCENAM
def_metgridSOURCENAM
def_metgridSOURCE_PATH$OUTPUT_RUN_DIR/extprd
def_metgridUNGRIB_SOURCE_PATH/export/jeff/NCEP_model_data/INPUT_DATA/NAM
def_metgridWPS_ROOT/export/WRF32/WPS
def_metgridWPS_ROOT/export/WRF32/WPS
def_metgridWPS_USE_MPINo
def_metgridWPS_USE_MPINo
def_metgridWRF_COREARW
def_metgridWRF_ROOT/export/WRF32/WRFV3
def_metgridWRF_USE_MPINo
def_realEXT_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_realEXT_DATAROOT$OUTPUT_RUN_DIR
def_realFCST_INTERVAL3
def_realFCST_INTERVAL3
def_realFCST_INTERVAL3
def_realFCST_LENGTH12
def_realFCST_LENGTH12
def_realFCST_LENGTH12
def_realFORMAT%y%j%H00%F
def_realMETGRID_INPUT_DIR$OUTPUT_RUN_DIR/wps-output
def_realMETGRID_PROC$NUM_PROCS
def_realMOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_realMOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_realMOAD_DATAROOT$OUTPUT_RUN_DIR
def_realMOAD_DATAROOT$OUTPUT_RUN_DIR
def_realREALPROC$NUM_PROCS
def_realSOURCENAM
def_realSOURCENAM
def_realSOURCE_PATH$OUTPUT_RUN_DIR/extprd
def_realUNGRIB_SOURCE_PATH/export/jeff/NCEP_model_data/INPUT_DATA/NAM
def_realWPS_ROOT/export/WRF32/WPS
def_realWPS_ROOT/export/WRF32/WPS
def_realWPS_USE_MPINo
def_realWPS_USE_MPINo
def_realWRF_COREARW
def_realWRF_ROOT/export/WRF32/WRFV3
def_realWRF_USE_MPINo
def_ungribEXT_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_ungribEXT_DATAROOT$OUTPUT_RUN_DIR
def_ungribFCST_INTERVAL3
def_ungribFCST_INTERVAL3
def_ungribFCST_INTERVAL3
def_ungribFCST_LENGTH12
def_ungribFCST_LENGTH12
def_ungribFCST_LENGTH12
def_ungribFORMAT%y%j%H00%F
def_ungribMETGRID_INPUT_DIR$OUTPUT_RUN_DIR/wps-output
def_ungribMETGRID_PROC$NUM_PROCS
def_ungribMOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_ungribMOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_ungribMOAD_DATAROOT$OUTPUT_RUN_DIR
def_ungribMOAD_DATAROOT$OUTPUT_RUN_DIR
def_ungribREALPROC$NUM_PROCS
def_ungribSOURCENAM
def_ungribSOURCENAM
def_ungribSOURCE_PATH$OUTPUT_RUN_DIR/extprd
def_ungribUNGRIB_SOURCE_PATH/export/jeff/NCEP_model_data/INPUT_DATA/NAM
def_ungribWPS_ROOT/export/WRF32/WPS
def_ungribWPS_ROOT/export/WRF32/WPS
def_ungribWPS_USE_MPINo
def_ungribWPS_USE_MPINo
def_ungribWRF_COREARW
def_ungribWRF_ROOT/export/WRF32/WRFV3
def_ungribWRF_USE_MPINo
def_wrfEXT_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_wrfEXT_DATAROOT$OUTPUT_RUN_DIR
def_wrfFCST_INTERVAL3
def_wrfFCST_INTERVAL3
def_wrfFCST_INTERVAL3
def_wrfFCST_LENGTH12
def_wrfFCST_LENGTH12
def_wrfFCST_LENGTH12
def_wrfFORMAT%y%j%H00%F
def_wrfMETGRID_INPUT_DIR$OUTPUT_RUN_DIR/wps-output
def_wrfMETGRID_PROC$NUM_PROCS
def_wrfMOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_wrfMOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
def_wrfMOAD_DATAROOT$OUTPUT_RUN_DIR
def_wrfMOAD_DATAROOT$OUTPUT_RUN_DIR
def_wrfREALPROC$NUM_PROCS
def_wrfSOURCENAM
def_wrfSOURCENAM
def_wrfSOURCE_PATH$OUTPUT_RUN_DIR/extprd
def_wrfUNGRIB_SOURCE_PATH/export/jeff/NCEP_model_data/INPUT_DATA/NAM
def_wrfWPS_ROOT/export/WRF32/WPS
def_wrfWPS_ROOT/export/WRF32/WPS
def_wrfWPS_USE_MPINo
def_wrfWPS_USE_MPINo
def_wrfWRF_COREARW
def_wrfWRF_ROOT/export/WRF32/WRFV3
def_wrfWRF_USE_MPINo
echoHello1EXT_DATAHOME/export/jeff/domains/AAutomatedTestCO
echoHello1EXT_DATAROOT$OUTPUT_RUN_DIR
echoHello1FCST_INTERVAL3
echoHello1FCST_INTERVAL3
echoHello1FCST_INTERVAL3
echoHello1FCST_LENGTH12
echoHello1FCST_LENGTH12
echoHello1FCST_LENGTH12
echoHello1FORMAT%y%j%H00%F
echoHello1METGRID_INPUT_DIR$OUTPUT_RUN_DIR/wps-output
echoHello1METGRID_PROC$NUM_PROCS
echoHello1MOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
echoHello1MOAD_DATAHOME/export/jeff/domains/AAutomatedTestCO
echoHello1MOAD_DATAROOT$OUTPUT_RUN_DIR
echoHello1MOAD_DATAROOT$OUTPUT_RUN_DIR
echoHello1REALPROC$NUM_PROCS
echoHello1SOURCENAM
echoHello1SOURCENAM
echoHello1SOURCE_PATH$OUTPUT_RUN_DIR/extprd
echoHello1UNGRIB_SOURCE_PATH/export/jeff/NCEP_model_data/INPUT_DATA/NAM
echoHello1WPS_ROOT/export/WRF32/WPS
echoHello1WPS_ROOT/export/WRF32/WPS
echoHello1WPS_USE_MPINo
echoHello1WPS_USE_MPINo
echoHello1WRF_COREARW
echoHello1WRF_ROOT/export/WRF32/WRFV3
echoHello1WRF_USE_MPINo

Configuration Files / Namelists From Workflow 'AAutomatedTestCO' (Before Run)

FileNameFile Text
namelist.input
&time_control            
run_days                 = 0,
run_hours                = 12,
run_minutes              = 0,
run_seconds              = 0,
start_year               = 2000,     2000,
start_month              = 01,       01,
start_day                = 24,       24,
start_hour               = 12,       12,
start_minute             = 00,       00,
start_second             = 00,       00,
end_year                 = 2000,     2000,
end_month                = 01,       01,
end_day                  = 25,       25,
end_hour                 = 12,       12,
end_minute               = 00,       00,
end_second               = 00,       00,
interval_seconds         = 21600,
input_from_file          = .true.,   .true.,
history_interval         = 180,       60,
frames_per_outfile       = 1000,     1000,
restart                  = .false.,
restart_interval         = 5000,
io_form_history          = 2,
io_form_restart          = 2,
io_form_input            = 2,
io_form_boundary         = 2,
debug_level              = 0,
/

&domains                 
time_step                = 37,
time_step_fract_num      = 0,
time_step_fract_den      = 1,
max_dom                  = 2,
e_we                     = 100,       88,
e_sn                     = 96,       82,
e_vert                   = 28,       28,
p_top_requested          = 5000,
num_metgrid_levels       = 40,
num_metgrid_soil_levels  = 4,
dx                       = 6200, 2066.667,
dy                       = 6200, 2066.667,
grid_id                  = 1,        2,
parent_id                = 1,        1,
i_parent_start           = 1,       36,
j_parent_start           = 1,       35,
parent_grid_ratio        = 1,        3,
parent_time_step_ratio   = 1,        3,
feedback                 = 1,
smooth_option            = 0,
/

&physics                 
mp_physics               = 3,        3,
ra_lw_physics            = 1,        1,
ra_sw_physics            = 1,        1,
radt                     = 30,       30,
sf_sfclay_physics        = 1,        1,
sf_surface_physics       = 2,        2,
bl_pbl_physics           = 1,        1,
bldt                     = 0,        0,
cu_physics               = 1,        1,
cudt                     = 5,        5,
isfflx                   = 1,
ifsnow                   = 0,
icloud                   = 1,
surface_input_source     = 1,
num_soil_layers          = 4,
sf_urban_physics         = 0,        0,
maxiens                  = 1,
maxens                   = 3,
maxens2                  = 3,
maxens3                  = 16,
ensdim                   = 144,
/

&fdda                    
/

&dynamics                
w_damping                = 0,
diff_opt                 = 1,
km_opt                   = 4,
diff_6th_opt             = 0,        0,
diff_6th_factor          = 0.12,     0.12,
base_temp                = 290.,
damp_opt                 = 0,
zdamp                    = 5000.,    5000.,
dampcoef                 = 0.2,      0.2,
khdif                    = 0,        0,
kvdif                    = 0,        0,
non_hydrostatic          = .true.,   .true.,
moist_adv_opt            = 1,        1,
scalar_adv_opt           = 1,        1,
/

&bdy_control             
spec_bdy_width           = 5,
spec_zone                = 1,
relax_zone               = 4,
specified                = .true.,  .false.,
nested                   = .false.,   .true.,
/

&grib2                   
/

&namelist_quilt          
nio_tasks_per_group      = 0,
nio_groups               = 1,
/
                                                                                                                                                      
namelist.wps
&share
 wrf_core = 'ARW',
 max_dom = 2,
 start_date = '2005-07-09_12:00:00', '2005-07-09_12:00:00', 
 end_date   = '2005-07-09_18:00:00', '2005-07-09_18:00:00', 
 interval_seconds = 10800,
 io_form_geogrid = 2,
 opt_output_from_geogrid_path = '/scratch/jeff/domains/AAutomatedTestCO/',
 debug_level = 0,
/

&geogrid
 parent_id         = 1,1,
 parent_grid_ratio = 1,3,
 i_parent_start    = 1,36,
 j_parent_start    = 1,35,
 e_we          = 100,88,
 e_sn          = 96,82,
 geog_data_res = '10m','10m',
 dx = 6200,
 dy = 6200,
 map_proj =  'lambert',
 ref_lat   = 39.872,
 ref_lon   = -105.052,
 truelat1  = 39.872,
 truelat2  = 39.872,
 stand_lon = -106.052,
 geog_data_path = '/scratch/WRF32/geog',
 opt_geogrid_tbl_path = '/scratch/jeff/domains/AAutomatedTestCO/',
 ref_x = 50.0,
 ref_y = 48.0,
/

&ungrib
 out_format = 'WPS',
 prefix = 'FILE',
/

&metgrid
 fg_name = 'FILE',
 io_form_metgrid = 2,
 opt_output_from_metgrid_path = '/scratch/jeff/domains/AAutomatedTestCO/',
 opt_metgrid_tbl_path = '/scratch/jeff/domains/AAutomatedTestCO/',
/

&mod_levs
 press_pa = 201300 , 200100 , 100000 ,
             95000 ,  90000 ,
             85000 ,  80000 ,
             75000 ,  70000 ,
             65000 ,  60000 ,
             55000 ,  50000 ,
             45000 ,  40000 ,
             35000 ,  30000 ,
             25000 ,  20000 ,
             15000 ,  10000 ,
              5000 ,   1000
 /


&domain_wizard
 grib_data_path = '/export/jeff/NCEP_model_data/INPUT_DATA/NAM',
 grib_vtable = 'Vtable.NAM',
 dwiz_name    =AAutomatedTestCO
 dwiz_desc    =automated test
 dwiz_user_rect_x1 =402
 dwiz_user_rect_y1 =267
 dwiz_user_rect_x2 =442
 dwiz_user_rect_y2 =297
 dwiz_show_political =true
 dwiz_center_over_gmt =true
 dwiz_latlon_space_in_deg =10
 dwiz_latlon_linecolor =-8355712
 dwiz_map_scale_pct =25
 dwiz_map_vert_scrollbar_pos =0
 dwiz_map_horiz_scrollbar_pos =0
 dwiz_gridpt_dist_km =6.2
 dwiz_mpi_command =
 dwiz_tcvitals =null
/

Workflow Log Files

/export/jeff/wrfportal-runs/AAutomatedTestCO-run/logs/workflow/workflow_2005070912.log
Workflow created on Thu Mar 24 16:17:08 -0600 2011. Portal (Internal Java) Workflow Manager
Thu Mar 24 16:17:09 -0600 2011newhep.fsl.noaa.govSubmitted def_ungrib job id=123485
Thu Mar 24 16:17:26 -0600 2011newhep.fsl.noaa.govdef_ungrib job id=123485 in state 'done'
Thu Mar 24 16:17:26 -0600 2011newhep.fsl.noaa.govdef_ungrib job id=123485 ran for 17 seconds
Thu Mar 24 16:17:31 -0600 2011newhep.fsl.noaa.govSubmitted def_metgrid job id=123486
Thu Mar 24 16:17:47 -0600 2011newhep.fsl.noaa.govdef_metgrid job id=123486 in state 'r'
Thu Mar 24 16:18:18 -0600 2011newhep.fsl.noaa.govdef_metgrid job id=123486 in state 'done'
Thu Mar 24 16:18:18 -0600 2011newhep.fsl.noaa.govdef_metgrid job id=123486 ran for 47 seconds
Thu Mar 24 16:18:23 -0600 2011newhep.fsl.noaa.govSubmitted def_real job id=123487
Thu Mar 24 16:18:39 -0600 2011newhep.fsl.noaa.govdef_real job id=123487 in state 'r'
Thu Mar 24 16:18:54 -0600 2011newhep.fsl.noaa.govdef_real job id=123487 in state 'done'
Thu Mar 24 16:18:54 -0600 2011newhep.fsl.noaa.govdef_real job id=123487 ran for 32 seconds